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  • Top cofit genes for GFF7294 from Variovorax sp. SCN45

    PTS IIA-like nitrogen-regulatory protein PtsN
    SEED: PTS system nitrogen-specific IIA component, PtsN
    KEGG: PTS system, nitrogen regulatory IIA component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3905 Aconitate hydratase 2 (EC 4.2.1.3) no 0.80
    2 GFF4454 Exoribonuclease II (EC 3.1.13.1) no 0.76
    3 GFF5876 Nitrogen regulation protein NtrY (EC 2.7.3.-) 0.33 0.75
    4 GFF4557 Dihydroorotase (EC 3.5.2.3) 0.39 0.75
    5 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) no 0.74
    6 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) 0.75 0.73
    7 GFF3649 C-type cytochrome biogenesis protein ResA (thioredoxin) 0.35 0.73
    8 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.72
    9 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.77 0.72
    10 GFF2523 Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297) 0.85 0.72
    11 GFF3952 LSU ribosomal protein L19p no 0.71
    12 GFF2852 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.67 0.71
    13 GFF2934 FIG002076: hypothetical protein 0.31 0.70
    14 GFF982 Cell division protein ZapE 0.68 0.70
    15 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.75 0.70
    16 GFF5491 Peptide deformylase (EC 3.5.1.88) 0.67 0.70
    17 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.64 0.69
    18 GFF497 Phytoene synthase (EC 2.5.1.32) 0.77 0.69
    19 GFF399 3'-to-5' exoribonuclease RNase R 0.85 0.69
    20 GFF6634 DNA mismatch repair protein MutS 0.47 0.69

    Or look for negative cofitness