Top cofit genes for GFF7293 from Variovorax sp. SCN45

Ribosome hibernation promoting factor Hpf
SEED: Ribosome hibernation protein YhbH
KEGG: putative sigma-54 modulation protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF903 Acetolactate synthase large subunit (EC 2.2.1.6) no 0.92
2 GFF1899 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 0.69 0.92
3 GFF936 Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) 0.50 0.92
4 GFF7379 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) no 0.92
5 GFF902 Transcriptional regulator, AsnC family no 0.92
6 GFF2818 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.56 0.91
7 GFF6028 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like no 0.91
8 GFF7381 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.37 0.91
9 GFF934 Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) 0.51 0.91
10 GFF6127 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 0.91 0.91
11 GFF6151 Transcriptional regulator, LysR family no 0.91
12 GFF7377 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) no 0.90
13 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.67 0.90
14 GFF5041 Malonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.18) 0.63 0.90
15 GFF268 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.90
16 GFF2843 Murein hydrolase activator NlpD no 0.90
17 GFF1098 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) 0.61 0.89
18 GFF292 Tol-Pal system beta propeller repeat protein TolB 0.79 0.89
19 GFF3067 Nitrogen regulation protein NtrB (EC 2.7.13.3) 0.63 0.89
20 GFF559 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.89

Or look for negative cofitness