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  • Top cofit genes for GFF7287 from Variovorax sp. SCN45

    Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2)
    SEED: Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)
    KEGG: dipeptide transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.57
    2 GFF6244 Predicted deacylase no 0.55
    3 GFF1506 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    4 GFF6519 Molybdenum cofactor cytidylyltransferase (EC 2.7.7.76) no 0.50
    5 GFF3490 Putative amidase R03093 no 0.49
    6 GFF5743 Flagellar motor switch protein FliM 0.30 0.48
    7 GFF2005 Transcriptional regulator, AraC family no 0.48
    8 GFF2708 no description no 0.47
    9 GFF4416 Conjugative transfer protein TrbD no 0.47
    10 GFF5986 hypothetical protein no 0.46
    11 GFF718 AraC-type DNA-binding domain-containing proteins no 0.46
    12 GFF3394 Benzoate ABC transporter, ATP-binding protein 1 no 0.46
    13 GFF4185 RNA polymerase ECF-type sigma factor no 0.45
    14 GFF3023 C4-dicarboxylate transport protein no 0.45
    15 GFF675 KEGG: 2'-5' RNA ligase no 0.45
    16 GFF6568 hypothetical protein no 0.44
    17 GFF2187 ATPase associated with various cellular activities, AAA_5 0.37 0.44
    18 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.73 0.44
    19 GFF7085 BUG/TctC family periplasmic protein no 0.44
    20 GFF3427 FIG01006093: hypothetical protein no 0.44

    Or look for negative cofitness