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  • Top cofit genes for GFF7277 from Variovorax sp. SCN45

    Mobile element protein
    SEED: Mobile element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1346 hypothetical protein no 0.70
    2 GFF3743 Twitching motility protein PilT no 0.69
    3 GFF5128 hypothetical protein no 0.69
    4 GFF169 Protein-glutamate methylesterase (EC 3.1.1.61) no 0.65
    5 GFF1832 TRAP transporter solute receptor, unknown substrate 3 no 0.64
    6 GFF5143 no description no 0.63
    7 GFF5666 Prevent host death protein, Phd antitoxin no 0.62
    8 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.62
    9 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) no 0.61
    10 GFF2153 type IV pili signal transduction protein PilI no 0.61
    11 GFF2155 Signal transduction histidine kinase CheA no 0.60
    12 GFF3886 Putative transmembrane protein no 0.60
    13 GFF6695 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) no 0.58
    14 GFF6087 Transcriptional regulator, AcrR family no 0.58
    15 GFF3600 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) no 0.58
    16 GFF342 ATP-dependent Clp protease adaptor protein ClpS no 0.58
    17 GFF2459 CzcABC family efflux RND transporter, transmembrane protein no 0.57
    18 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) no 0.57
    19 GFF269 2-methylaconitate isomerase no 0.57
    20 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.57

    Or look for negative cofitness