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  • Top cofit genes for GFF7268 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3962 Opine dehydrogenase (EC 1.5.1.28) no 0.55
    2 GFF2590 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) no 0.54
    3 GFF6331 D-octopine dehydrogenase (EC 1.5.1.11) no 0.53
    4 GFF5100 putative membrane protein no 0.53
    5 GFF5028 hypothetical protein no 0.51
    6 GFF3879 Uncharacterized protein, similar to the N-terminal domain of Lon protease no 0.51
    7 GFF3136 no description no 0.49
    8 GFF5626 Patatin no 0.48
    9 GFF6584 Pyruvate kinase (EC 2.7.1.40) no 0.47
    10 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    11 GFF3706 ABC transporter, permease protein 2 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.47
    12 GFF4952 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes no 0.47
    13 GFF2289 Glutathione-regulated potassium-efflux system ancillary protein KefF no 0.47
    14 GFF6158 carbon monoxide dehydrogenase E protein no 0.47
    15 GFF6231 Amidases related to nicotinamidase no 0.47
    16 GFF5947 Large extracellular alpha-helical protein no 0.46
    17 GFF1847 Nucleoside ABC transporter, substrate-binding protein no 0.46
    18 GFF1760 Probable transmembrane protein no 0.45
    19 GFF5544 FIG001614: Membrane protein no 0.45
    20 GFF7328 no description no 0.44

    Or look for negative cofitness