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  • Top cofit genes for GFF7261 from Variovorax sp. SCN45

    2,5-dioxovalerate dehydrogenase (EC 1.2.1.26)
    SEED: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26)
    KEGG: NADP-dependent aldehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF543 Uncharacterized deacetylase PA5390 no 0.49
    2 GFF5600 no description no 0.47
    3 GFF1267 Probable lipoprotein signal peptide 0.40 0.47
    4 GFF2955 hypothetical protein 0.41 0.45
    5 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.45
    6 GFF4721 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.43
    7 GFF4586 no description no 0.43
    8 GFF707 probable integral membrane protein NMA1898 0.50 0.42
    9 GFF36 Similar to Agmatine deiminase no 0.42
    10 GFF2531 Transcriptional regulator, AsnC family no 0.42
    11 GFF565 Prepilin-type cleavage/methylation-like protein no 0.41
    12 GFF6797 Glutamine ABC transporter, ATP-binding protein GlnQ 0.60 0.40
    13 GFF682 2-hydroxychromene-2-carboxylate isomerase family protein no 0.40
    14 GFF2070 D-aminoacyl-tRNA deacylase (EC 3.1.1.96) 0.36 0.39
    15 GFF1598 no description no 0.39
    16 GFF3729 Transcriptional regulator, AraC family no 0.39
    17 GFF2793 Tricarboxylate transport protein TctC no 0.39
    18 GFF746 BUG/TctC family periplasmic protein no 0.38
    19 GFF4092 Copper tolerance protein no 0.38
    20 GFF940 Permease of the drug/metabolite transporter (DMT) superfamily no 0.38

    Or look for negative cofitness