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  • Top cofit genes for GFF7258 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3082 hypothetical protein no 0.69
    2 GFF4581 hypothetical protein no 0.57
    3 GFF2476 Tripartite tricarboxylate transporter TctB family no 0.54
    4 GFF6421 ATPase, AAA family no 0.53
    5 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) no 0.53
    6 GFF3409 Probable lipoprotein signal peptide no 0.52
    7 GFF1468 Transcriptional regulator, GntR family no 0.51
    8 GFF6865 Transcriptional regulator, Crp/Fnr family no 0.50
    9 GFF4028 Cytochrome c, class I no 0.50
    10 GFF4129 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    11 GFF3617 Dienelactone hydrolase family protein no 0.49
    12 GFF6884 FIG00932717: hypothetical protein no 0.49
    13 GFF4608 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) no 0.49
    14 GFF1932 no description no 0.48
    15 GFF3192 hypothetical protein no 0.48
    16 GFF7282 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.48
    17 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.48
    18 GFF3392 Transcriptional regulator, AraC family no 0.48
    19 GFF374 Transcription elongation factor GreA no 0.48
    20 GFF5667 Transcriptional regulator, LysR family no 0.48

    Or look for negative cofitness