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  • Top cofit genes for GFF725 from Variovorax sp. SCN45

    TonB-dependent siderophore receptor
    SEED: TonB-dependent siderophore receptor
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF816 L-carnitine dehydratase/bile acid-inducible protein F no 0.58
    2 GFF3886 Putative transmembrane protein no 0.57
    3 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.57
    4 GFF6107 Zinc transporter, ZIP family no 0.56
    5 GFF1627 ABC-type siderophore export system, fused ATPase and permease components 0.48 0.56
    6 GFF5144 no description no 0.54
    7 GFF5412 no description no 0.54
    8 GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.54
    9 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.54
    10 GFF2623 Aspartate aminotransferase no 0.54
    11 GFF4432 Two-component system response regulator protein 0.41 0.54
    12 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD no 0.53
    13 GFF6634 DNA mismatch repair protein MutS no 0.53
    14 GFF2025 Uncharacterized protein SCO3165 no 0.53
    15 GFF5384 Proteins containing SET domain no 0.52
    16 GFF2153 type IV pili signal transduction protein PilI no 0.52
    17 GFF3061 BUG/TctC family periplasmic protein no 0.52
    18 GFF3999 GMP reductase (EC 1.7.1.7) no 0.52
    19 GFF3845 Ribonuclease E (EC 3.1.26.12) no 0.52
    20 GFF1224 Transcriptional regulator, LysR family no 0.52

    Or look for negative cofitness