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  • Top cofit genes for GFF7246 from Variovorax sp. SCN45

    HtrA protease/chaperone protein
    SEED: HtrA protease/chaperone protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4670 Transcriptional regulator, AcrR family no 0.60
    2 GFF6121 FIG003461: hypothetical protein no 0.56
    3 GFF3710 Lactoylglutathione lyase and related lyases no 0.54
    4 GFF2556 UPF0337 family protein no 0.53
    5 GFF159 Acyl-CoA dehydrogenase/oxidase domain protein no 0.53
    6 GFF6572 Conjugative transfer protein TrbG no 0.52
    7 GFF2536 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) no 0.52
    8 GFF7177 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B no 0.52
    9 GFF6255 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase (EC 3.6.1.63) no 0.51
    10 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.50
    11 GFF7210 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.49
    12 GFF1498 putative 2-pyrone-4,6-dicarboxylic acid hydrolase no 0.49
    13 GFF5763 Signal transduction histidine kinase CheA no 0.48
    14 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.47
    15 GFF3798 FIG00932573: hypothetical protein no 0.47
    16 GFF40 no description no 0.47
    17 GFF4849 Conjugative transfer protein TrbB no 0.46
    18 GFF2256 Uncharacterized protein YcgL no 0.46
    19 GFF6090 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.45
    20 GFF2264 Transcriptional regulator, LysR family no 0.45

    Or look for negative cofitness