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Cofit
Protein
Homologs
Top cofit genes for GFF7245 from
Variovorax sp. SCN45
universal stress protein, UspA family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4611
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
no
0.70
2
GFF4580
hypothetical protein
no
0.69
3
GFF443
Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
no
0.68
4
GFF933
YgfD: protein that forms a complex with the methylmalonyl-CoA mutase in a pathway for conversion of succinyl-CoA to propionyl-CoA
no
0.68
5
GFF6198
D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83)
no
0.66
6
GFF3755
Transcriptional regulator, GntR family
no
0.64
7
GFF6704
no description
no
0.62
8
GFF7376
Transcriptional regulator, LysR family
no
0.62
9
GFF4334
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.62
10
GFF1900
Transcriptional regulator, LysR family
no
0.62
11
GFF6032
Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1)
no
0.61
12
GFF3067
Nitrogen regulation protein NtrB (EC 2.7.13.3)
no
0.61
13
GFF272
thioesterase superfamily protein
no
0.61
14
GFF6888
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.60
15
GFF5678
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
no
0.60
16
GFF2370
L-carnitine dehydratase/bile acid-inducible protein F
no
0.59
17
GFF3415
Cyclase
0.68
0.59
18
GFF2543
Uncharacterized membrane protein Bcep18194_A6058
no
0.59
19
GFF3251
SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)
no
0.59
20
GFF3584
hypothetical protein
no
0.59
Or look for
negative cofitness