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  • Top cofit genes for GFF7235 from Variovorax sp. SCN45

    FAD/FMN-containing dehydrogenase Mvan_5531
    SEED: FAD/FMN-containing dehydrogenases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.56
    2 GFF5831 Ketosteroid isomerase-related protein no 0.53
    3 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) no 0.51
    4 GFF3414 Fumarylacetoacetase (EC 3.7.1.2) no 0.49
    5 GFF4262 hypothetical protein no 0.48
    6 GFF3204 no description no 0.48
    7 GFF1009 Transcriptional regulator, AraC family no 0.48
    8 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.48
    9 GFF4195 BUG/TctC family periplasmic protein no 0.48
    10 GFF2196 no description no 0.47
    11 GFF4742 ABC transporter, substrate-binding protein RSc1750 no 0.47
    12 GFF3473 no description no 0.47
    13 GFF3613 Protein of unknown function DUF55 no 0.47
    14 GFF850 Two-component transcriptional response regulator, LuxR family no 0.47
    15 GFF543 Uncharacterized deacetylase PA5390 no 0.46
    16 GFF2228 glycerophosphoryl diester phosphodiesterase no 0.46
    17 GFF2097 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.45
    18 GFF1865 Transcriptional regulator, AraC family no 0.45
    19 GFF2168 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.45
    20 GFF2437 hypothetical protein no 0.45

    Or look for negative cofitness