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  • Top cofit genes for PS417_03660 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: FIG002994: Putative transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11235 hypothetical protein no 0.21
    2 PS417_03930 thymidine phosphorylase no 0.20
    3 PS417_19930 DNA methyltransferase no 0.20
    4 PS417_07340 calcium channel protein no 0.19
    5 PS417_20585 chemotaxis protein no 0.19
    6 PS417_12800 alpha-amylase 0.64 0.19
    7 PS417_19600 exonuclease 0.33 0.19
    8 PS417_23300 hypothetical protein no 0.18
    9 PS417_19635 lipid kinase no 0.18
    10 PS417_18860 transcriptional regulator no 0.18
    11 PS417_01735 ABC transporter permease 0.19 0.18
    12 PS417_00630 nitrate ABC transporter substrate-binding protein 0.14 0.18
    13 PS417_11365 membrane protein no 0.18
    14 PS417_14155 branched-chain amino acid ABC transporter permease no 0.18
    15 PS417_18180 dioxygenase no 0.17
    16 PS417_09655 RNA polymerase sigma factor no 0.17
    17 PS417_15960 multidrug transporter no 0.17
    18 PS417_16680 MFS transporter no 0.17
    19 PS417_13235 siderophore biosynthesis protein no 0.17
    20 PS417_07220 LysR family transcriptional regulator 0.31 0.17

    Or look for negative cofitness