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  • Top cofit genes for GFF7169 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4770 Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA no 0.50
    2 GFF658 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.50
    3 GFF935 no description no 0.49
    4 GFF3534 hypothetical protein no 0.48
    5 GFF6126 putative membrane protein no 0.48
    6 GFF4796 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.46
    7 GFF6556 hypothetical protein no 0.45
    8 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein no 0.45
    9 GFF6769 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.44
    10 GFF4742 ABC transporter, substrate-binding protein RSc1750 no 0.44
    11 GFF2168 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.44
    12 GFF6473 hypothetical protein no 0.44
    13 GFF1874 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.44
    14 GFF3395 Benzoate ABC transporter, permease protein 2 no 0.43
    15 GFF347 Exported protein no 0.43
    16 GFF2747 17 kDa surface antigen no 0.43
    17 GFF5897 hypothetical protein no 0.43
    18 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) no 0.42
    19 GFF5449 Probable lipoprotein YiaD no 0.42
    20 GFF6455 Bll3817 protein no 0.42

    Or look for negative cofitness