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  • Top cofit genes for GFF7167 from Variovorax sp. SCN45

    Pirin
    SEED: Pirin, N-terminal:Pirin, C-terminal

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.60
    2 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.58
    3 GFF6370 T6SS component Hcp no 0.53
    4 GFF5612 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) no 0.52
    5 GFF1548 Tripartite tricarboxylate transporter TctA family no 0.52
    6 GFF1646 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching no 0.52
    7 GFF1633 Probable transmembrane sensor no 0.52
    8 GFF2691 no description no 0.51
    9 GFF5991 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.49
    10 GFF1073 Glutathione S-transferase (EC 2.5.1.18) no 0.49
    11 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) 0.26 0.49
    12 GFF2138 Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) no 0.49
    13 GFF2439 no description no 0.48
    14 GFF36 Similar to Agmatine deiminase no 0.47
    15 GFF6059 ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) no 0.47
    16 GFF2735 Transcriptional regulator, LysR family no 0.47
    17 GFF4430 hypothetical protein no 0.46
    18 GFF3186 FIG01046500: hypothetical protein no 0.46
    19 GFF2829 Uncharacterized protein CC_3060 no 0.46
    20 GFF4150 Salicylate hydroxylase (EC 1.14.13.1) no 0.45

    Or look for negative cofitness