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  • Top cofit genes for GFF7158 from Variovorax sp. SCN45

    Pirin
    SEED: Pirin-related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5687 FIG01027591: hypothetical protein no 0.66
    2 GFF2201 hypothetical protein no 0.59
    3 GFF5211 Alkaline phosphatase (EC 3.1.3.1) no 0.56
    4 GFF4372 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.29 0.56
    5 GFF3216 hypothetical protein no 0.55
    6 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.54
    7 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.54
    8 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.53
    9 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily no 0.51
    10 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A no 0.51
    11 GFF2083 putative periplasmic membrane protein no 0.51
    12 GFF2504 Cell division protein ZapD no 0.51
    13 GFF7295 HPr kinase/phosphorylase no 0.51
    14 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.41 0.51
    15 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.50
    16 GFF2649 putative autotransporter protein no 0.50
    17 GFF3753 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.50
    18 GFF7373 CaiB/BaiF family protein 0.29 0.50
    19 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.49
    20 GFF1073 Glutathione S-transferase (EC 2.5.1.18) no 0.49

    Or look for negative cofitness