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Cofit
Protein
Homologs
Top cofit genes for GFF7158 from
Variovorax sp. SCN45
Pirin
SEED: Pirin-related protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5687
FIG01027591: hypothetical protein
no
0.66
2
GFF2201
hypothetical protein
no
0.59
3
GFF5211
Alkaline phosphatase (EC 3.1.3.1)
no
0.56
4
GFF4372
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
0.29
0.56
5
GFF3216
hypothetical protein
no
0.55
6
GFF592
Glutamyl-Q tRNA(Asp) synthetase
no
0.54
7
GFF5862
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.54
8
GFF5235
General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD)
no
0.53
9
GFF2208
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
no
0.51
10
GFF5844
Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A
no
0.51
11
GFF2083
putative periplasmic membrane protein
no
0.51
12
GFF2504
Cell division protein ZapD
no
0.51
13
GFF7295
HPr kinase/phosphorylase
no
0.51
14
GFF5307
Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241)
0.41
0.51
15
GFF3456
Possible regulatory protein similar to urea ABC transporter, substrate binding protein
no
0.50
16
GFF2649
putative autotransporter protein
no
0.50
17
GFF3753
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
no
0.50
18
GFF7373
CaiB/BaiF family protein
0.29
0.50
19
GFF1055
Fumarylacetoacetate hydrolase family protein
no
0.49
20
GFF1073
Glutathione S-transferase (EC 2.5.1.18)
no
0.49
Or look for
negative cofitness