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  • Top cofit genes for GFF7149 from Variovorax sp. SCN45

    4-hydroxyproline epimerase (EC 5.1.1.8)
    SEED: 4-hydroxyproline epimerase (EC 5.1.1.8)
    KEGG: 4-hydroxyproline epimerase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.65
    2 GFF1149 FIG110192: hypothetical protein no 0.64
    3 GFF3852 Tetrapyrrole methylase family protein no 0.63
    4 GFF6086 Putative short-chain dehydrogenase no 0.59
    5 GFF3386 hypothetical protein no 0.57
    6 GFF6216 hypothetical protein no 0.55
    7 GFF6537 hypothetical protein no 0.55
    8 GFF6430 L-carnitine dehydratase/bile acid-inducible protein F no 0.54
    9 GFF6011 putative decarboxylase no 0.54
    10 GFF7333 Transcriptional regulator, MerR family no 0.54
    11 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) no 0.54
    12 GFF5793 Low-affinity inorganic phosphate transporter 0.22 0.54
    13 GFF4520 hypothetical protein no 0.54
    14 GFF4068 Heavy metal sensor histidine kinase no 0.53
    15 GFF2019 FIG00976956: hypothetical protein no 0.53
    16 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.53
    17 GFF4009 D-amino acid dehydrogenase (EC 1.4.99.6) 0.33 0.53
    18 GFF530 no description no 0.53
    19 GFF1352 Probable glutathione s-transferase protein (EC 2.5.1.18) no 0.52
    20 GFF5829 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52

    Or look for negative cofitness