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Cofit
Protein
Homologs
Top cofit genes for GFF7130 from
Variovorax sp. SCN45
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6059
ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron)
no
0.57
2
GFF6909
Amidohydrolase
no
0.49
3
GFF4567
Transcriptional regulator, LysR family
no
0.47
4
GFF3454
Cys regulon transcriptional activator CysB
no
0.46
5
GFF4015
KEGG: lactoylglutathione lyase
no
0.46
6
GFF181
Protein of unknown function (DUF1501)
no
0.44
7
GFF2910
BUG/TctC family periplasmic protein
no
0.44
8
GFF4170
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.43
9
GFF121
Uncharacterized MFS-type transporter
no
0.43
10
GFF6276
Uncharacterized MFS-type transporter
no
0.42
11
GFF4073
Copper tolerance protein
no
0.42
12
GFF1953
hypothetical protein
no
0.41
13
GFF2215
L,D-transpeptidase
no
0.41
14
GFF4376
UPF0380 proteins YafZ and homologs
no
0.41
15
GFF4533
Multidrug resistance transporter, Bcr/CflA family
no
0.40
16
GFF909
Alcohol dehydrogenase (EC 1.1.1.1)
no
0.40
17
GFF5303
Tricarboxylate transport transcriptional regulator TctD
no
0.40
18
GFF3040
hypothetical protein
no
0.40
19
GFF5119
Ammonium transporter
0.26
0.40
20
GFF7138
ATP-dependent 23S rRNA helicase DbpA
no
0.40
Or look for
negative cofitness