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  • Top cofit genes for PS417_03625 from Pseudomonas simiae WCS417

    lipid A 3-O-deacylase
    SEED: Lipid A 3-O-deacylase
    KEGG: lipid A 3-O-deacylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00440 N-acetylmuramoyl-L-alanine amidase 0.58 0.66
    2 PS417_11460 divalent metal cation transporter MntH no 0.59
    3 PS417_25405 catalase 0.26 0.58
    4 PS417_06775 antibiotic transporter 0.53 0.56
    5 PS417_26500 thioesterase 0.21 0.56
    6 PS417_07515 aconitate hydratase no 0.55
    7 PS417_06770 multidrug transporter 0.25 0.55
    8 PS417_07510 aspartyl beta-hydroxylase 0.58 0.51
    9 PS417_06325 LysR family transcriptional regulator 0.23 0.50
    10 PS417_15075 NAD-glutamate dehydrogenase no 0.49
    11 PS417_03990 ligand-gated channel protein 0.61 0.49
    12 PS417_28085 phosphate-binding protein 0.24 0.49
    13 PS417_28075 phosphate ABC transporter permease no 0.49
    14 PS417_27295 hypothetical protein 0.54 0.49
    15 PS417_25400 bacterioferritin no 0.49
    16 PS417_28070 phosphate ABC transporter ATP-binding protein no 0.47
    17 PS417_28080 phosphate ABC transporter permease 0.37 0.47
    18 PS417_01550 cell envelope biogenesis protein AsmA no 0.47
    19 PS417_00665 RND transporter no 0.46
    20 PS417_06330 S-(hydroxymethyl)glutathione dehydrogenase no 0.45

    Or look for negative cofitness