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  • Top cofit genes for GFF7129 from Variovorax sp. SCN45

    Mobile element protein
    SEED: Mobile element protein
    KEGG: putative transposase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) no 0.59
    2 GFF4640 hypothetical protein no 0.58
    3 GFF1374 hypothetical protein no 0.55
    4 GFF4992 Transcriptional regulator, AcrR family no 0.55
    5 GFF2617 no description no 0.54
    6 GFF1792 Transcriptional regulator, IclR family no 0.54
    7 GFF1575 BUG/TctC family periplasmic protein no 0.53
    8 GFF1520 Transcriptional regulator, IclR family no 0.53
    9 GFF1047 hypothetical protein no 0.53
    10 GFF1797 FIG022199: FAD-binding protein no 0.53
    11 GFF7192 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    12 GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.52
    13 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.52
    14 GFF4593 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.52
    15 GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) no 0.51
    16 GFF1885 Gluconate transporter family protein no 0.51
    17 GFF5548 Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains no 0.51
    18 GFF6871 FIG00905613: hypothetical protein no 0.51
    19 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) no 0.50
    20 GFF808 Polyhydroxyalkanoic acid synthase no 0.50

    Or look for negative cofitness