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Cofit
Protein
Homologs
Top cofit genes for GFF7127 from
Variovorax sp. SCN45
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4888
Mlr6156 protein
no
0.53
2
GFF5314
Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
no
0.52
3
GFF643
no description
no
0.50
4
GFF7330
Transcription elongation factor
no
0.50
5
GFF3342
FIG00347825: hypothetical protein
no
0.50
6
GFF3378
hypothetical protein
no
0.50
7
GFF6786
CopG protein
no
0.49
8
GFF1393
hypothetical protein
no
0.48
9
GFF1383
Hypothetical protein in cluster with At3g50560-like gene family
no
0.47
10
GFF6726
hypothetical protein
no
0.47
11
GFF6105
Aspartate racemase (EC 5.1.1.13)
no
0.47
12
GFF3157
Sulfite dehydrogenase (quinone), membrane-anchor subunit SoeC (EC 1.8.5.6)
no
0.47
13
GFF1451
FIG00456379: hypothetical protein
no
0.47
14
GFF1336
ABC transporter, substrate-binding protein RSc1750
no
0.47
15
GFF1858
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.45
16
GFF1691
Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake
no
0.45
17
GFF5163
Soluble lytic murein transglycosylase (EC 4.2.2.n1)
no
0.44
18
GFF2205
hypothetical protein
no
0.43
19
GFF2230
3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
no
0.43
20
GFF6594
Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
no
0.43
Or look for
negative cofitness