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  • Top cofit genes for GFF7109 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3214 FIG138928: iron-regulated membrane protein no 0.57
    2 GFF3934 PhnB protein no 0.55
    3 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.54
    4 GFF3972 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.53
    5 GFF3774 hypothetical protein no 0.53
    6 GFF5978 Nucleoside 2-deoxyribosyltransferase no 0.52
    7 GFF3989 PUTATIVE 4-HYDROXYBENZOYL-COA THIOESTERASE PROTEIN( EC:3.1.2.23 ) no 0.52
    8 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) no 0.52
    9 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.52
    10 GFF7000 Flagellar L-ring protein FlgH no 0.52
    11 GFF2024 L-lysine permease no 0.52
    12 GFF6442 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.51
    13 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.50
    14 GFF5341 Efflux ABC transporter, permease protein no 0.50
    15 GFF837 FIG01002808: hypothetical protein no 0.49
    16 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.49
    17 GFF7126 KEGG: transposase no 0.49
    18 GFF5752 Flagellin FliC no 0.49
    19 GFF4195 BUG/TctC family periplasmic protein no 0.48
    20 GFF757 hypothetical protein no 0.48

    Or look for negative cofitness