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  • Top cofit genes for GFF7106 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4902 hypothetical protein no 0.57
    2 GFF4372 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.53
    3 GFF5271 Transcriptional regulator, LysR family no 0.53
    4 GFF682 2-hydroxychromene-2-carboxylate isomerase family protein no 0.53
    5 GFF4649 Iron-chelator utilization protein no 0.51
    6 GFF421 hypothetical protein no 0.51
    7 GFF4190 no description no 0.51
    8 GFF6612 y4eB gene in pNGR234a homolog no 0.50
    9 GFF4731 Assimilatory nitrate reductase large subunit (EC 1.7.99.4) no 0.50
    10 GFF3827 UPF0118 membrane protein SMc00793 no 0.49
    11 GFF3214 FIG138928: iron-regulated membrane protein no 0.48
    12 GFF3317 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) no 0.48
    13 GFF2755 Ribosyl nicotinamide transporter, PnuC-like no 0.48
    14 GFF3564 BUG/TctC family periplasmic protein no 0.47
    15 GFF6237 hypothetical protein no 0.47
    16 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.47
    17 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.47
    18 GFF5906 Nitrilase (EC 3.5.5.7) no 0.46
    19 GFF6049 Acyl-CoA dehydrogenase family protein no 0.46
    20 GFF520 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.46

    Or look for negative cofitness