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  • Top cofit genes for GFF7099 from Variovorax sp. SCN45

    5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
    SEED: 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
    KEGG: 5-carboxymethyl-2-hydroxymuconate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4200 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) no 0.57
    2 GFF4743 Aspartate aminotransferase (EC 2.6.1.1) no 0.56
    3 GFF1729 HIPA PROTEIN no 0.53
    4 GFF796 Transcriptional activator MetR no 0.53
    5 GFF6622 Mobile element protein no 0.53
    6 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) no 0.52
    7 GFF618 Lactoylglutathione lyase and related lyases no 0.52
    8 GFF3265 Homoserine O-acetyltransferase (EC 2.3.1.31) no 0.51
    9 GFF864 no description no 0.51
    10 GFF6114 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.50
    11 GFF2953 Transcriptional regulator, AraC family no 0.50
    12 GFF3655 no description no 0.50
    13 GFF5750 Flagellar M-ring protein FliF no 0.49
    14 GFF747 Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) no 0.49
    15 GFF3750 no description no 0.49
    16 GFF4662 no description no 0.48
    17 GFF943 Intracellular PHB depolymerase no 0.48
    18 GFF430 RND efflux system, membrane fusion protein no 0.48
    19 GFF2849 hypothetical protein no 0.47
    20 GFF4466 Uncharacterized protein Ajs_3662 no 0.47

    Or look for negative cofitness