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Cofit
Protein
Homologs
Top cofit genes for GFF7082 from
Variovorax sp. SCN45
TnpA transposase
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2083
putative periplasmic membrane protein
no
0.51
2
GFF7116
2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39)
no
0.50
3
GFF145
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
no
0.49
4
GFF1481
L-carnitine dehydratase/bile acid-inducible protein F
no
0.49
5
GFF5625
Putative transmembrane protein
no
0.46
6
GFF2308
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center
no
0.46
7
GFF5725
Methyl-accepting chemotaxis sensor/transducer protein
no
0.45
8
GFF1444
PRC-barrel
no
0.45
9
GFF674
no description
no
0.45
10
GFF4919
hypothetical protein
no
0.45
11
GFF629
hypothetical protein
no
0.45
12
GFF6271
Phosphatidylglycerophosphatase A (EC 3.1.3.27)
0.25
0.45
13
GFF6057
ABC-type Fe3+ transport system, periplasmic component
no
0.44
14
GFF3733
no description
no
0.44
15
GFF5239
hypothetical protein
no
0.44
16
GFF6347
AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination
no
0.44
17
GFF6457
no description
no
0.43
18
GFF3921
Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
no
0.43
19
GFF6607
Plasmid replication initiator protein
no
0.43
20
GFF1208
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.43
Or look for
negative cofitness