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  • Top cofit genes for GFF7082 from Variovorax sp. SCN45

    TnpA transposase
    SEED: Mobile element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2083 putative periplasmic membrane protein no 0.51
    2 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) no 0.50
    3 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) no 0.49
    4 GFF1481 L-carnitine dehydratase/bile acid-inducible protein F no 0.49
    5 GFF5625 Putative transmembrane protein no 0.46
    6 GFF2308 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center no 0.46
    7 GFF5725 Methyl-accepting chemotaxis sensor/transducer protein no 0.45
    8 GFF1444 PRC-barrel no 0.45
    9 GFF674 no description no 0.45
    10 GFF4919 hypothetical protein no 0.45
    11 GFF629 hypothetical protein no 0.45
    12 GFF6271 Phosphatidylglycerophosphatase A (EC 3.1.3.27) 0.25 0.45
    13 GFF6057 ABC-type Fe3+ transport system, periplasmic component no 0.44
    14 GFF3733 no description no 0.44
    15 GFF5239 hypothetical protein no 0.44
    16 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.44
    17 GFF6457 no description no 0.43
    18 GFF3921 Tryptophan 2,3-dioxygenase (EC 1.13.11.11) no 0.43
    19 GFF6607 Plasmid replication initiator protein no 0.43
    20 GFF1208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.43

    Or look for negative cofitness