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  • Top cofit genes for GFF708 from Variovorax sp. SCN45

    Oxidoreductase, GMC family
    SEED: Choline dehydrogenase (EC 1.1.99.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF777 no description no 0.59
    2 GFF4893 FIG00640418: hypothetical protein no 0.56
    3 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.55
    4 GFF1075 no description no 0.54
    5 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) no 0.54
    6 GFF4300 Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) / conserved protein associated with acetyl-CoA C-acyltransferase no 0.52
    7 GFF1525 RNA polymerase ECF-type sigma factor no 0.52
    8 GFF7264 Gluconolactonase (EC 3.1.1.17) no 0.51
    9 GFF2039 Transcriptional regulator, AcrR family no 0.50
    10 GFF741 Transcriptional regulator, LysR family 0.36 0.50
    11 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.50
    12 GFF648 integral membrane sensor signal transduction histidine kinase no 0.50
    13 GFF6715 Transcriptional regulator of RpiR family in catabolic operon no 0.49
    14 GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.49
    15 GFF5188 no description no 0.48
    16 GFF1138 Transcriptional regulator, AcrR family no 0.48
    17 GFF5142 no description no 0.48
    18 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism no 0.48
    19 GFF4858 Transposase no 0.48
    20 GFF5918 T6SS component TssC (ImpC/VipB) no 0.47

    Or look for negative cofitness