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  • Top cofit genes for GFF7077 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4378 HYPOTHETICAL/UNKNOWN PROTEIN no 0.53
    2 GFF1990 Transcriptional regulator, MerR family no 0.53
    3 GFF307 FIG143263: Glycosyl transferase no 0.51
    4 GFF1523 KEGG: transmembrane sensor no 0.51
    5 GFF373 Probable transmembrane protein no 0.50
    6 GFF3267 RNA-binding protein no 0.50
    7 GFF4215 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ no 0.50
    8 GFF3374 no description no 0.48
    9 GFF463 Malonyl-CoA decarboxylase (EC 4.1.1.9) no 0.48
    10 GFF3202 no description no 0.48
    11 GFF3297 hypothetical protein Ajs_0007 no 0.48
    12 GFF4414 Conjugative transfer protein TrbB no 0.48
    13 GFF5950 no description no 0.47
    14 GFF3872 DNA recombination and repair protein RecO no 0.47
    15 GFF7160 hypothetical protein no 0.46
    16 GFF3663 Permease of the drug/metabolite transporter (DMT) superfamily no 0.46
    17 GFF4107 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.46
    18 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) no 0.46
    19 GFF4811 FIG074102: hypothetical protein no 0.46
    20 GFF1113 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.45

    Or look for negative cofitness