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  • Top cofit genes for GFF7067 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: Oxidoreductase, short chain dehydrogenase/reductase family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.63
    2 GFF6383 FIG00440100: hypothetical protein no 0.58
    3 GFF1986 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.58
    4 GFF1207 no description no 0.56
    5 GFF5917 T6SS component TssB (ImpB/VipA) no 0.53
    6 GFF347 Exported protein no 0.53
    7 GFF2172 Permease of the drug/metabolite transporter (DMT) superfamily no 0.52
    8 GFF66 hypothetical protein no 0.52
    9 GFF2002 Thioredoxin related protein PA2694 no 0.52
    10 GFF1599 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no 0.52
    11 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.52
    12 GFF6052 HNH endonuclease family protein no 0.52
    13 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.51
    14 GFF6262 Transcriptional regulator PhnF no 0.51
    15 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.51
    16 GFF1806 Na+/H+-dicarboxylate symporter no 0.51
    17 GFF6015 Transcriptional regulator PA0877, LysR family no 0.50
    18 GFF6385 Mll4878 protein 0.30 0.50
    19 GFF1882 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit (EC 1.2.7.-) no 0.50
    20 GFF6390 GtrA-like protein no 0.49

    Or look for negative cofitness