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Cofit
Protein
Homologs
Top cofit genes for GFF7053 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6153
Transcriptional activator of acetoin/glycerol metabolism
no
0.54
2
GFF1023
UPF0311 protein RPA1785
no
0.52
3
GFF1313
Cellulose synthase operon protein C
no
0.52
4
GFF958
ElaB protein
no
0.50
5
GFF3863
RNA polymerase sigma factor RpoE
no
0.50
6
GFF7189
dioxygenase, TauD/TfdA family
no
0.49
7
GFF7139
MATE efflux family protein
no
0.47
8
GFF5855
T1SS secreted agglutinin RTX
no
0.47
9
GFF3794
hypothetical protein
no
0.47
10
GFF5000
PUTATIVE ZINC PROTEASE PROTEIN
no
0.47
11
GFF4403
Mobile element protein
no
0.47
12
GFF2914
Glutamine ABC transporter, ATP-binding protein GlnQ
no
0.47
13
GFF1316
Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12)
no
0.47
14
GFF3666
Inner membrane protein YbiR, putative anion permease
no
0.46
15
GFF794
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.46
16
GFF1115
Putative transmembrane protein
no
0.46
17
GFF5290
hypothetical protein
no
0.45
18
GFF4459
Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
no
0.45
19
GFF4238
no description
no
0.45
20
GFF2560
FIG00932643: hypothetical protein
no
0.45
Or look for
negative cofitness