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Cofit
Protein
Homologs
Top cofit genes for GFF705 from
Variovorax sp. SCN45
Transcriptional regulator, AcrR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF475
Acetyl-CoA synthetase (EC 6.2.1.1)
0.37
0.72
2
GFF6150
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
no
0.71
3
GFF450
Outer membrane vitamin B12 receptor BtuB
no
0.70
4
GFF6770
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
no
0.70
5
GFF4592
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
no
0.70
6
GFF6322
Glutathione synthetase (EC 6.3.2.3)
no
0.70
7
GFF2370
L-carnitine dehydratase/bile acid-inducible protein F
no
0.70
8
GFF6033
Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1)
no
0.69
9
GFF5404
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
no
0.69
10
GFF6305
Malate synthase G (EC 2.3.3.9)
0.25
0.69
11
GFF6193
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.69
12
GFF6401
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
no
0.69
13
GFF5823
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
no
0.69
14
GFF5331
Transposase and inactivated derivatives
no
0.69
15
GFF4412
Coupling protein VirD4, ATPase required for T-DNA transfer
0.33
0.69
16
GFF559
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
no
0.69
17
GFF3583
AMP nucleosidase (EC 3.2.2.4)
no
0.68
18
GFF700
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.68
19
GFF401
PhbF
no
0.67
20
GFF1900
Transcriptional regulator, LysR family
no
0.67
Or look for
negative cofitness