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  • Top cofit genes for GFF7033 from Variovorax sp. SCN45

    protein of unknown function DUF427
    SEED: protein of unknown function DUF427

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF271 2-methylcitrate synthase (EC 2.3.3.5) no 0.59
    2 GFF5246 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.42 0.59
    3 GFF1248 FMN reductase (NADPH) (EC 1.5.1.38) no 0.59
    4 GFF4344 acyl-CoA dehydrogenase, putative phosphotransferase no 0.59
    5 GFF1256 Probable NADH dehydrogenase/NAD(P)H nitroreductase no 0.58
    6 GFF3147 hypothetical protein no 0.58
    7 GFF2772 Site-specific tyrosine recombinase XerD 0.43 0.57
    8 GFF273 Transcriptional regulator, Xre family no 0.57
    9 GFF5084 FIG00933367: hypothetical protein no 0.57
    10 GFF1205 Oxidoreductase probably involved in sulfite reduction no 0.56
    11 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) no 0.56
    12 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) no 0.56
    13 GFF374 Transcription elongation factor GreA no 0.56
    14 GFF2987 CBS domain protein 0.48 0.56
    15 GFF1098 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) no 0.55
    16 GFF946 Iron-sulfur cluster regulator IscR no 0.55
    17 GFF270 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117) no 0.55
    18 GFF6591 Transcriptional regulator, GntR family no 0.55
    19 GFF4773 Broad-specificity amino acid ABC transporter, ATP-binding protein 1 0.31 0.55
    20 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) no 0.55

    Or look for negative cofitness