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  • Top cofit genes for GFF7 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4321 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.64
    2 GFF3536 Alcohol dehydrogenase (EC 1.1.1.1) no 0.55
    3 GFF330 Nucleoside ABC transporter, permease protein 1 no 0.53
    4 GFF5135 DNA repair exonuclease family protein YhaO no 0.53
    5 GFF5044 ABC transporter, ATP-binding protein (cluster 9, phospholipid) no 0.53
    6 GFF2547 Type I antifreeze protein no 0.52
    7 GFF306 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.50
    8 GFF5918 T6SS component TssC (ImpC/VipB) no 0.50
    9 GFF6616 UPF0380 proteins YafZ and homologs no 0.49
    10 GFF4351 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) no 0.49
    11 GFF6090 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.49
    12 GFF3980 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-) no 0.48
    13 GFF7308 Uncharacterized MFS-type transporter no 0.48
    14 GFF7237 hypothetical protein no 0.47
    15 GFF4265 hypothetical protein no 0.47
    16 GFF1956 Ser/Thr protein phosphatase family protein no 0.46
    17 GFF1443 Excinuclease ABC subunit A paralog of unknown function no 0.45
    18 GFF5797 no description no 0.44
    19 GFF4849 Conjugative transfer protein TrbB no 0.44
    20 GFF4300 Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) / conserved protein associated with acetyl-CoA C-acyltransferase no 0.44

    Or look for negative cofitness