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  • Top cofit genes for GFF6988 from Variovorax sp. SCN45

    Flagellar hook protein FlgE
    SEED: Flagellar hook protein FlgE

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4388 Type IV secretory pathway, protease TraF no 0.68
    2 GFF4405 hypothetical protein no 0.53
    3 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.49
    4 GFF1548 Tripartite tricarboxylate transporter TctA family no 0.49
    5 GFF4036 hypothetical protein no 0.47
    6 GFF994 Cytoskeleton protein RodZ no 0.47
    7 GFF7051 hypothetical protein no 0.47
    8 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.46
    9 GFF1633 Probable transmembrane sensor no 0.46
    10 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) no 0.46
    11 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.46
    12 GFF375 hypothetical protein no 0.45
    13 GFF1672 BUG/TctC family periplasmic protein no 0.45
    14 GFF4883 Translation-disabling ACNase RloC no 0.44
    15 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.44
    16 GFF2647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.44
    17 GFF77 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.43
    18 GFF6440 Molybdate-binding domain of ModE no 0.43
    19 GFF2975 SAM-dependent methyltransferase no 0.43
    20 GFF4915 hypothetical protein no 0.43

    Or look for negative cofitness