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  • Top cofit genes for GFF6984 from Variovorax sp. SCN45

    RNA polymerase sigma factor for flagellar operon
    SEED: RNA polymerase sigma factor for flagellar operon

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5993 putative membrane protein no 0.56
    2 GFF5838 Probable signal peptide protein precursor no 0.55
    3 GFF6402 Imidazolonepropionase (EC 3.5.2.7) no 0.54
    4 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.53
    5 GFF6149 FAD-dependent oxidoreductase no 0.52
    6 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.51
    7 GFF5872 Inner membrane protein YbhQ no 0.50
    8 GFF2789 Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29) no 0.50
    9 GFF1433 hypothetical protein no 0.50
    10 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) no 0.49
    11 GFF3851 Uncharacterized MFS-type transporter no 0.49
    12 GFF5033 ABC-type spermidine/putrescine transport system, permease component II no 0.49
    13 GFF3665 no description no 0.48
    14 GFF1607 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.48
    15 GFF6153 Transcriptional activator of acetoin/glycerol metabolism no 0.48
    16 GFF4240 Integral membrane protein no 0.47
    17 GFF6472 membrane efflux protein no 0.46
    18 GFF3862 hypothetical protein no 0.46
    19 GFF485 hypothetical protein no 0.46
    20 GFF4789 FIG01126746: hypothetical protein no 0.46

    Or look for negative cofitness