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  • Top cofit genes for GFF6959 from Variovorax sp. SCN45

    Putative analog of CcoH, COG3198
    SEED: Putative analog of CcoH, COG3198
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5586 Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190) no 0.52
    2 GFF4174 FIG00919961: hypothetical protein no 0.49
    3 GFF1876 Dihydrodipicolinate synthase family no 0.49
    4 GFF1053 no description no 0.47
    5 GFF2900 Subtilisin-like serine proteases no 0.47
    6 GFF3267 RNA-binding protein no 0.46
    7 GFF2198 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC no 0.45
    8 GFF879 BUG/TctC family periplasmic protein no 0.45
    9 GFF4649 Iron-chelator utilization protein no 0.45
    10 GFF2638 Putative 2-component regulator no 0.45
    11 GFF3462 Urea ABC transporter, permease protein UrtC no 0.45
    12 GFF6223 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.44
    13 GFF3782 hypothetical protein no 0.44
    14 GFF4576 BUG/TctC family periplasmic protein no 0.43
    15 GFF1849 FIG00347667: hypothetical protein no 0.43
    16 GFF6089 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) no 0.43
    17 GFF1307 Homoserine dehydrogenase (EC 1.1.1.3) no 0.43
    18 GFF4233 no description no 0.43
    19 GFF5951 no description no 0.43
    20 GFF3176 Two-component transcriptional response regulator, LuxR family no 0.42

    Or look for negative cofitness