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  • Top cofit genes for GFF6946 from Variovorax sp. SCN45

    Sensory box histidine kinase/response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6899 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) no 0.55
    2 GFF6898 hypothetical protein no 0.55
    3 GFF461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.51
    4 GFF6900 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) no 0.49
    5 GFF5711 hypothetical protein no 0.49
    6 GFF6945 Two-component transcriptional response regulator, OmpR family no 0.46
    7 GFF2453 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1) no 0.46
    8 GFF3704 FIG00536957: hypothetical protein no 0.44
    9 GFF3954 Similar to cobalamin biosynthesis protein CbiB no 0.43
    10 GFF3813 no description no 0.41
    11 GFF5020 Tripartite tricarboxylate transporter TctB family no 0.41
    12 GFF2482 Urease accessory protein UreE no 0.40
    13 GFF6815 FIG00453801: hypothetical protein no 0.40
    14 GFF5337 Outer-membrane-phospholipid-binding lipoprotein MlaA no 0.40
    15 GFF3812 Bis-ABC ATPase Uup 0.26 0.40
    16 GFF5302 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.39
    17 GFF1869 no description no 0.39
    18 GFF6177 Putative transmembrane protein no 0.38
    19 GFF3374 no description no 0.38
    20 GFF5499 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.38

    Or look for negative cofitness