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Cofit
Protein
Homologs
Top cofit genes for GFF6945 from
Variovorax sp. SCN45
Two-component transcriptional response regulator, OmpR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6900
Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)
no
0.65
2
GFF6898
hypothetical protein
no
0.59
3
GFF6899
Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
no
0.55
4
GFF3813
no description
no
0.52
5
GFF6947
transcriptional regulator, Crp/Fnr family
no
0.50
6
GFF963
Oligopeptidase A (EC 3.4.24.70)
no
0.47
7
GFF6946
Sensory box histidine kinase/response regulator
no
0.46
8
GFF2821
Hemin ABC transporter, permease protein
no
0.46
9
GFF171
Histidine kinase
no
0.45
10
GFF2759
hypothetical protein
no
0.45
11
GFF513
Chitinase (EC 3.2.1.14)
no
0.44
12
GFF853
hypothetical protein
no
0.44
13
GFF6177
Putative transmembrane protein
no
0.44
14
GFF2961
CzcABC family efflux RND transporter, transmembrane protein
no
0.43
15
GFF4991
Polyhydroxyalkanoate granule-associated protein PhaF
no
0.43
16
GFF2564
Two-component transcriptional response regulator, LuxR family
no
0.43
17
GFF3521
DNA-binding response regulator KdpE
no
0.43
18
GFF254
N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2
no
0.43
19
GFF4992
Transcriptional regulator, AcrR family
no
0.43
20
GFF1835
Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
no
0.42
Or look for
negative cofitness