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  • Top cofit genes for GFF6927 from Variovorax sp. SCN45

    Transcriptional regulator, ArsR family
    SEED: Transcriptional regulator, ArsR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination 0.43 0.57
    2 GFF1186 Ferrichrome-iron receptor no 0.56
    3 GFF199 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA 0.36 0.55
    4 GFF803 MutT/Nudix family protein 0.52 0.54
    5 GFF6932 no description no 0.52
    6 GFF325 Nucleoside ABC transporter, substrate-binding protein no 0.51
    7 GFF5728 Methyl-accepting chemotaxis sensor/transducer protein no 0.51
    8 GFF476 InterPro IPR005134 COGs COG2862 0.37 0.51
    9 GFF6335 no description no 0.50
    10 GFF5968 no description no 0.50
    11 GFF4098 hypothetical protein no 0.50
    12 GFF1909 FIG00537389: hypothetical protein no 0.49
    13 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.49
    14 GFF1598 no description no 0.49
    15 GFF6608 hypothetical protein no 0.48
    16 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.48
    17 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) no 0.48
    18 GFF3659 Two-component transcriptional response regulator, OmpR family 0.28 0.48
    19 GFF2399 TonB-dependent receptor no 0.48
    20 GFF4920 Isochorismatase family protein YecD 0.49 0.48

    Or look for negative cofitness