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  • Top cofit genes for PS417_03520 from Pseudomonas simiae WCS417

    secretin
    SEED: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
    KEGG: type III secretion protein SctC

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00485 ABC transporter permease no 0.23
    2 PS417_28355 cardiolipin synthetase no 0.23
    3 PS417_28430 alpha-2-macroglobulin no 0.21
    4 PS417_10470 membrane protein 0.35 0.20
    5 PS417_10970 effector protein no 0.20
    6 PS417_00690 hypothetical protein no 0.20
    7 PS417_26465 hypothetical protein no 0.19
    8 PS417_08380 ABC transporter ATP-binding protein no 0.19
    9 PS417_16065 3-phytase no 0.19
    10 PS417_15695 molybdenum cofactor biosynthesis protein A no 0.19
    11 PS417_24155 ATP-binding protein no 0.19
    12 PS417_15705 nitrate reductase no 0.18
    13 PS417_19165 insecticidal toxin complex protein no 0.18
    14 PS417_18440 hypothetical protein 0.16 0.18
    15 PS417_22640 cytochrome C biogenesis protein CcmE no 0.18
    16 PS417_19275 hypothetical protein no 0.18
    17 PS417_10800 caspase-1, p20 no 0.18
    18 PS417_19965 histidine kinase no 0.18
    19 PS417_20465 hypothetical protein no 0.18
    20 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) no 0.17

    Or look for negative cofitness