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  • Top cofit genes for GFF6915 from Variovorax sp. SCN45

    Alkyl hydroperoxide reductase and/or thiol-specific antioxidant family (AhpC/TSA) protein
    SEED: PPO candidate 1

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6012 Tricarboxylate transport protein TctC no 0.52
    2 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) no 0.48
    3 GFF6687 hypothetical protein no 0.47
    4 GFF4737 Nitrate ABC transporter, substrate-binding protein no 0.47
    5 GFF3201 no description no 0.46
    6 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.45
    7 GFF4937 no description no 0.44
    8 GFF3570 Organic hydroperoxide resistance transcriptional regulator no 0.44
    9 GFF3434 Organic hydroperoxide resistance protein no 0.44
    10 GFF2267 Integral membrane protein no 0.44
    11 GFF3880 Cell division integral membrane protein, YggT and half-length relatives no 0.43
    12 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.43
    13 GFF5069 BUG/TctC family periplasmic protein no 0.43
    14 GFF3469 Glutaminase (EC 3.5.1.2) no 0.42
    15 GFF6412 Histidine ABC transporter, permease protein no 0.42
    16 GFF2521 FIG00931781: hypothetical protein no 0.41
    17 GFF3672 no description no 0.41
    18 GFF2324 Lactam utilization protein LamB no 0.41
    19 GFF3785 Transcriptional regulator, AcrR family no 0.41
    20 GFF3195 hypothetical protein no 0.41

    Or look for negative cofitness