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  • Top cofit genes for GFF6911 from Variovorax sp. SCN45

    Transcriptional regulator, LacI family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF440 CobN-like chelatase BtuS for metalloporphyrine salvage no 0.74
    2 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) no 0.72
    3 GFF450 Outer membrane vitamin B12 receptor BtuB no 0.72
    4 GFF2273 Transcriptional regulator, AcrR family no 0.72
    5 GFF7064 Glutamate--cysteine ligase (EC 6.3.2.2) no 0.71
    6 GFF6305 Malate synthase G (EC 2.3.3.9) no 0.71
    7 GFF1994 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.70
    8 GFF3583 AMP nucleosidase (EC 3.2.2.4) no 0.70
    9 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) no 0.70
    10 GFF4829 Isocitrate lyase (EC 4.1.3.1) no 0.70
    11 GFF2055 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.21 0.70
    12 GFF343 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) no 0.69
    13 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein no 0.69
    14 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.68
    15 GFF7035 UspA no 0.67
    16 GFF7377 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) no 0.67
    17 GFF1167 Predicted Lactate-responsive regulator, IclR family no 0.67
    18 GFF3067 Nitrogen regulation protein NtrB (EC 2.7.13.3) no 0.67
    19 GFF6322 Glutathione synthetase (EC 6.3.2.3) no 0.67
    20 GFF6150 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) no 0.67

    Or look for negative cofitness