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  • Top cofit genes for PS417_03515 from Pseudomonas simiae WCS417

    type III secretion protein
    SEED: type III secretion protein HrpT

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02950 tRNA-dihydrouridine synthase B no 0.24
    2 PS417_09205 membrane protein no 0.20
    3 PS417_23590 bleomycin resistance protein 0.42 0.19
    4 PS417_26365 EmrB/QacA subfamily drug resistance transporter no 0.19
    5 PS417_12345 cobalamin biosynthesis protein CobW no 0.18
    6 PS417_21830 TetR family transcriptional regulator no 0.18
    7 PS417_21385 hypothetical protein no 0.18
    8 PS417_11830 membrane protein no 0.17
    9 PS417_16785 ABC transporter permease no 0.17
    10 PS417_26235 (Fe-S)-binding protein no 0.17
    11 PS417_13690 chemotaxis protein no 0.17
    12 PS417_07560 universal stress protein UspA no 0.17
    13 PS417_27650 chemotaxis protein no 0.16
    14 PS417_21240 hypothetical protein no 0.16
    15 PS417_26460 NAD-dependent DNA ligase LigB no 0.16
    16 PS417_23865 XRE family transcriptional regulator no 0.16
    17 PS417_10740 hypothetical protein no 0.16
    18 PS417_13775 dehydrogenase no 0.16
    19 PS417_18155 membrane protein no 0.16
    20 PS417_26230 electron transfer flavoprotein subunit alpha no 0.16

    Or look for negative cofitness