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  • Top cofit genes for GFF6906 from Variovorax sp. SCN45

    Transcriptional regulator, MarR family
    SEED: Transcriptional regulator, MarR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF538 FIG00454528: hypothetical protein no 0.61
    2 GFF4151 RidA/YER057c/UK114 superfamily, group 1 no 0.55
    3 GFF5700 UPF0758 family protein no 0.50
    4 GFF5970 Uncharacterized MFS-type transporter no 0.49
    5 GFF4310 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.49
    6 GFF3189 hypothetical protein no 0.49
    7 GFF3291 no description no 0.49
    8 GFF2584 Sulfate permease no 0.48
    9 GFF7270 Altronate dehydratase (EC 4.2.1.7) no 0.48
    10 GFF4513 no description no 0.48
    11 GFF1488 Tetrapartite efflux system, membrane fusion component FusE-like no 0.47
    12 GFF2056 Septum-associated rare lipoprotein A no 0.46
    13 GFF7178 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) no 0.46
    14 GFF1028 FIG027190: Putative transmembrane protein no 0.46
    15 GFF2956 Uncharacterized protein YfaT no 0.45
    16 GFF1727 no description no 0.45
    17 GFF4568 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) no 0.44
    18 GFF2063 Uncharacterized MFS-type transporter no 0.44
    19 GFF2724 FIG01220323: hypothetical protein no 0.44
    20 GFF5766 Chemotaxis protein CheD no 0.44

    Or look for negative cofitness