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  • Top cofit genes for GFF6902 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5115 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE no 0.63
    2 GFF2136 Ribokinase (EC 2.7.1.15) no 0.56
    3 GFF7031 hypothetical protein no 0.54
    4 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.54
    5 GFF4414 Conjugative transfer protein TrbB no 0.52
    6 GFF1273 no description no 0.52
    7 GFF2341 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.50
    8 GFF633 Urea ABC transporter, ATPase protein UrtD no 0.50
    9 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.26 0.49
    10 GFF4333 Transcriptional regulator, LysR family no 0.49
    11 GFF6355 T6SS secretion lipoprotein TssJ (VasD) no 0.48
    12 GFF3934 PhnB protein no 0.47
    13 GFF2138 Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) no 0.47
    14 GFF3705 Amidases related to nicotinamidase no 0.46
    15 GFF5778 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.46
    16 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.46
    17 GFF1468 Transcriptional regulator, GntR family no 0.45
    18 GFF6590 Niacin transporter NiaP no 0.45
    19 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 no 0.45
    20 GFF5554 FIG00347521: hypothetical protein no 0.45

    Or look for negative cofitness