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  • Top cofit genes for PS417_03510 from Pseudomonas simiae WCS417

    type III secretion system negative regulatory protein RspV
    SEED: negative regulator of hrp expression HrpV

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_14710 isochorismatase no 0.22
    2 PS417_19585 acyl-CoA dehydrogenase no 0.21
    3 PS417_19000 MFS transporter no 0.20
    4 PS417_21220 acetyl-CoA acetyltransferase 0.15 0.19
    5 PS417_02265 TonB-dependent receptor 0.46 0.19
    6 PS417_11865 xylose isomerase no 0.18
    7 PS417_00800 lipoprotein no 0.18
    8 PS417_23925 acetyl-CoA synthetase no 0.17
    9 PS417_21900 allophanate hydrolase no 0.17
    10 PS417_02100 membrane protein no 0.17
    11 PS417_09870 hypothetical protein no 0.17
    12 PS417_19495 N-acyl-L-amino acid amidohydrolase no 0.17
    13 PS417_18215 AraC family transcriptional regulator no 0.17
    14 PS417_09795 lipase no 0.17
    15 PS417_23575 hypothetical protein no 0.17
    16 PS417_12910 alanine racemase no 0.16
    17 PS417_22750 RND transporter no 0.16
    18 PS417_24815 ethanolamine transporter no 0.16
    19 PS417_15125 glutathione S-transferase no 0.16
    20 PS417_16680 MFS transporter no 0.16

    Or look for negative cofitness