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  • Top cofit genes for GFF690 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF856 no description no 0.75
    2 GFF3704 FIG00536957: hypothetical protein no 0.66
    3 GFF7357 Phenylacetate ABC transporter, ATP-binding protein 1 0.17 0.64
    4 GFF3779 hypothetical protein no 0.61
    5 GFF1668 BUG/TctC family periplasmic protein no 0.61
    6 GFF3241 hypothetical protein no 0.60
    7 GFF3146 no description no 0.59
    8 GFF4959 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.58
    9 GFF6114 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.58
    10 GFF2658 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.56
    11 GFF5743 Flagellar motor switch protein FliM no 0.55
    12 GFF5707 Transcriptional regulator, LysR family no 0.54
    13 GFF3904 Probable signal peptide protein no 0.54
    14 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.54
    15 GFF3315 Cu(I)-responsive transcriptional regulator no 0.53
    16 GFF2180 hypothetical protein no 0.53
    17 GFF4518 Methylglyoxal reductase, dihydroxyacetone producing @ 2,5-didehydrogluconate reductase (2-dehydro-L-gulonate-forming) (EC 1.1.1.346) no 0.53
    18 GFF4967 Glutathione S-transferase family protein no 0.52
    19 GFF6334 no description no 0.52
    20 GFF1375 Transcriptional regulator, LysR family no 0.52

    Or look for negative cofitness