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  • Top cofit genes for GFF6899 from Variovorax sp. SCN45

    Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
    SEED: Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
    KEGG: biofilm PGA synthesis lipoprotein PgaB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6898 hypothetical protein 0.68 0.83
    2 GFF6900 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) 0.95 0.76
    3 GFF6901 no description no 0.61
    4 GFF3813 no description no 0.56
    5 GFF6946 Sensory box histidine kinase/response regulator no 0.55
    6 GFF6945 Two-component transcriptional response regulator, OmpR family no 0.55
    7 GFF3954 Similar to cobalamin biosynthesis protein CbiB no 0.55
    8 GFF6410 Histidine utilization repressor 0.52 0.54
    9 GFF171 Histidine kinase no 0.53
    10 GFF3812 Bis-ABC ATPase Uup no 0.49
    11 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.38 0.49
    12 GFF6886 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.48
    13 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.45 0.46
    14 GFF2453 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1) no 0.45
    15 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA 0.46 0.45
    16 GFF3272 Inner membrane protein, KefB/KefC family 0.32 0.44
    17 GFF5715 Flagellar basal-body rod protein FlgB no 0.43
    18 GFF5711 hypothetical protein no 0.43
    19 GFF4988 Gentisate 1,2-dioxygenase (EC 1.13.11.4) no 0.43
    20 GFF1544 Two-component system sensor histidine kinase/response regulator hybrid no 0.43

    Or look for negative cofitness