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Cofit
Protein
Homologs
Top cofit genes for GFF6890 from
Variovorax sp. SCN45
Threonine efflux protein
SEED: Threonine efflux protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2379
Serine/threonine protein kinase
no
0.67
2
GFF4485
FIG00715336: hypothetical protein
no
0.66
3
GFF5323
Type IV pilus biogenesis protein PilQ
no
0.63
4
GFF5322
Type IV pilus biogenesis protein PilP
no
0.63
5
GFF3825
Autolysin sensor kinase (EC 2.7.3.-)
no
0.63
6
GFF5325
3-dehydroquinate synthase (EC 4.2.3.4)
no
0.62
7
GFF2154
twitching motility protein PilJ
0.32
0.62
8
GFF5320
Type IV pilus biogenesis protein PilN
0.34
0.62
9
GFF5490
Uncharacterized protein with LysM domain, COG1652
no
0.62
10
GFF2508
Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)
no
0.62
11
GFF5412
no description
no
0.62
12
GFF2510
Type IV fimbrial assembly, ATPase PilB
no
0.61
13
GFF3826
Response regulator receiver:LytTr DNA-binding region
no
0.61
14
GFF993
Type IV pilus biogenesis protein PilF
no
0.61
15
GFF5419
Type IV pilus biogenesis protein PilE
0.31
0.61
16
GFF33
Type IV pilus biogenesis protein PilZ
no
0.61
17
GFF2151
twitching motility protein PilG
no
0.61
18
GFF6737
Uncharacterized aldehyde oxidase, 2Fe-2S subunit
no
0.61
19
GFF5319
Type IV pilus biogenesis protein PilM
no
0.60
20
GFF5321
Type IV pilus biogenesis protein PilO
0.31
0.60
Or look for
negative cofitness