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  • Top cofit genes for GFF6890 from Variovorax sp. SCN45

    Threonine efflux protein
    SEED: Threonine efflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2379 Serine/threonine protein kinase no 0.67
    2 GFF4485 FIG00715336: hypothetical protein no 0.66
    3 GFF5323 Type IV pilus biogenesis protein PilQ no 0.63
    4 GFF5322 Type IV pilus biogenesis protein PilP no 0.63
    5 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) no 0.63
    6 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.62
    7 GFF2154 twitching motility protein PilJ 0.32 0.62
    8 GFF5320 Type IV pilus biogenesis protein PilN 0.34 0.62
    9 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.62
    10 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.62
    11 GFF5412 no description no 0.62
    12 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.61
    13 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.61
    14 GFF993 Type IV pilus biogenesis protein PilF no 0.61
    15 GFF5419 Type IV pilus biogenesis protein PilE 0.31 0.61
    16 GFF33 Type IV pilus biogenesis protein PilZ no 0.61
    17 GFF2151 twitching motility protein PilG no 0.61
    18 GFF6737 Uncharacterized aldehyde oxidase, 2Fe-2S subunit no 0.61
    19 GFF5319 Type IV pilus biogenesis protein PilM no 0.60
    20 GFF5321 Type IV pilus biogenesis protein PilO 0.31 0.60

    Or look for negative cofitness