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  • Top cofit genes for PS417_03505 from Pseudomonas simiae WCS417

    type III secretion system protein
    SEED: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
    KEGG: type III secretion protein SctU

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27995 type IV secretion protein Rhs no 0.27
    2 PS417_19180 sugar-binding protein no 0.23
    3 PS417_03555 ATPase AAA 0.80 0.22
    4 PS417_00840 hypothetical protein no 0.22
    5 PS417_28205 transporter no 0.21
    6 PS417_12315 peptidylprolyl isomerase no 0.19
    7 PS417_02165 ZapA no 0.18
    8 PS417_14885 dienelactone hydrolase no 0.18
    9 PS417_28335 dihydroorotase no 0.18
    10 PS417_22215 membrane protein no 0.18
    11 PS417_23505 cell division protein DedD no 0.18
    12 PS417_26145 hypothetical protein 0.11 0.18
    13 PS417_25990 malonyl-CoA O-methyltransferase no 0.17
    14 PS417_14880 thioesterase no 0.17
    15 PS417_06140 cold-shock protein no 0.17
    16 PS417_20325 hypothetical protein no 0.17
    17 PS417_22595 hypothetical protein no 0.17
    18 PS417_11090 LacI family transcriptional regulator 0.16 0.17
    19 PS417_10820 N-methylproline demethylase no 0.17
    20 PS417_25015 fimbria A protein no 0.16

    Or look for negative cofitness