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Cofit
Protein
Homologs
Top cofit genes for GFF6887 from
Variovorax sp. SCN45
Transporter, LysE family
SEED: Transporter, LysE family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF699
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.73
2
GFF6190
3-hydroxyisobutyrate dehydrogenase family protein
no
0.73
3
GFF7306
FolM Alternative dihydrofolate reductase 1
no
0.70
4
GFF2934
FIG002076: hypothetical protein
no
0.68
5
GFF6129
(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)
no
0.67
6
GFF982
Cell division protein ZapE
0.57
0.67
7
GFF431
Esterase/lipase
no
0.67
8
GFF1900
Transcriptional regulator, LysR family
no
0.67
9
GFF1127
Aldehyde dehydrogenase (EC 1.2.1.3)
0.65
0.67
10
GFF1773
D-amino acid dehydrogenase (EC 1.4.99.6)
no
0.67
11
GFF213
tmRNA-binding protein SmpB
no
0.65
12
GFF3507
Transcriptional regulator, DeoR family
no
0.65
13
GFF4557
Dihydroorotase (EC 3.5.2.3)
no
0.64
14
GFF4383
hypothetical protein
no
0.64
15
GFF6191
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.64
16
GFF5383
DNA topoisomerase III, Burkholderia type (EC 5.99.1.2)
no
0.64
17
GFF2935
FIG004684: SpoVR-like protein
no
0.64
18
GFF6198
D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83)
no
0.64
19
GFF6528
Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)
no
0.64
20
GFF4454
Exoribonuclease II (EC 3.1.13.1)
no
0.63
Or look for
negative cofitness