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  • Top cofit genes for GFF6873 from Variovorax sp. SCN45

    Aminotransferase, DegT/DnrJ/EryC1/StrS family
    SEED: Aminotransferase, DegT/DnrJ/EryC1/StrS family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.36 0.66
    2 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.66
    3 GFF6067 Permease of the drug/metabolite transporter (DMT) superfamily no 0.64
    4 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.64
    5 GFF6294 Cell division protein no 0.64
    6 GFF5402 Transcriptional regulator, IclR family no 0.64
    7 GFF2505 hypothetical protein no 0.63
    8 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.62
    9 GFF6392 hypothetical protein no 0.62
    10 GFF266 RND efflux system, inner membrane transporter no 0.61
    11 GFF5515 Lysophospholipase (EC 3.1.1.5) no 0.61
    12 GFF1319 no description no 0.60
    13 GFF531 hypothetical protein no 0.60
    14 GFF3893 hypothetical protein no 0.60
    15 GFF1300 hypothetical protein no 0.59
    16 GFF7322 hypothetical protein no 0.59
    17 GFF2504 Cell division protein ZapD 0.25 0.59
    18 GFF6637 Putative amidase amiC (EC 3.5.1.4) no 0.59
    19 GFF4839 Transcriptional regulator PA2737, MerR family no 0.59
    20 GFF4405 hypothetical protein no 0.59

    Or look for negative cofitness